These photos demonstrate the docking a model of cellulose (glucose
tetramer= cellulobiose dimer) to the active site of termite cellulase.
Mr. John Tollett (A&M Consolidated High School) assisted with the construction
of the models.
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| ligands | native (empty) active site | complex |
The Structure of an Endoglucanse from Termite, Nasutitermes takasagoensis.
Shahram Khademi, Linda A. Guarino, Hirofumi Watanabe,
Gaku Tokuda, and Edgar F. Meyer
(2002) Acta Cryst., D58, 653-659.
Summary
Contrary to conventional wisdom, it has been shown recently
that termites do not necessarily depend on symbiotic bacteria to process
cellulose. They secrete their own cellulases, mainly endo-b-1,4-glucanase
and b-1,4-glucosidase.
Here, the first structure of an endogenous endoglucanase
from the higher termite, Nasutitermes takasagoensis, (NtEgl)
is reported at 1.55 Å resolution. NtEgl has the general folding of
an (a/a)6 barrel,
which is a common folding pattern for glycosyl hydrolases family 9.
The 3D structural analysis shows that conserved Glu 412
is the catalytic acid/base residue and conserved Asp 54 or Asp 57 is the
base.
The enzyme has a Ca2+ binding site near its substrate
binding cleft.
The comparison between the structure of Ca2+-free enzyme,
produced by reducing the pH of the soaked crystal from 5.6 (the optimum
pH for enzyme) to 2.5, with that of the Ca2+-bound enzyme did not show
significant differences in locations of a-carbon atoms.
The main differences are in the conformation of the residues
ligating the Ca2+ ion.
The overall structure of NtEgl at pH 6.5 is similar to
that of pH 5.6.
The major change observed was in the conformation of
the side chain of the catalytic acid/base Glu 412 which rotates from a
hydrophobic cavity to a relatively hydrophilic environment.
This side chain displacement may decrease enzyme activity
at higher pH.
Research was supported by the Robert A. Welch Foundation (A-328), the US National Science Foundation (DBI-0242318) and the State of Texas Advanced Technology Program (5170317-1999)
(c) E. Meyer 2003